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Intron Name: Anas_platyrhynchos_platyrhynchos_1_157293094_157296362_F

Intron Information:

Intron Rank:

134674

Intron Class:

major

Intron Phase:

Intron Coordinates:

157293094 - 157296362

Intron Length:

3269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAGGTAAC

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

TTTAAGTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

74.4

36.1

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

0.9

0.6

89.4

19.2

Minor 5ss

37.1

-1.5

3.1

49.3

40.4

Minor BPS

47.2

-0.1

2.6

77.66

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037011

157281571 - 157296369

14799