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Intron Name: Anas_platyrhynchos_platyrhynchos_1_157518123_157518697_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
157518123 - 157518697

Intron Length:
575

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGTTTTC

5'SS Class:
major

3'SS Sequence:
TTTTTTATTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TATTTTTTATTT

Flanking Amino Acid:
HTAALDFFFQKPSGFLSMLD

Intron Amino Acid Position:
768

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.5
0.65
1.1
75.1
36

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
94.3
1
0.6
93.4
22.5

Minor 5ss
43.4
-0.7
3.1
61.2
43.7

Minor BPS
65.4
0.56
1.5
80.16
36.3

Associated Gene:

Gene:
MYO16

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

157415275 - 157720289
305015

157415936 - 157675543
259608

157415275 - 157673298
258024