Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_157579658_157582702_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

157579658 - 157582702

Intron Length:

3045

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CATTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

ACTGCTTTACCA

Flanking Amino Acid:

RSTFDTKIKHVNCVLEAFGH

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

78.2

36.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

86.3

0.82

0.8

80.9

30.7

Minor 5ss

38.5

-1.3

2.8

50.4

39.2

Minor BPS

0.18

1.7

64.77

42.4

Associated Gene:

Gene:

MYO16

Ensembl Gene ID:

ENSAPLG00000007605

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042744

157415275 - 157720289

305015

ENSAPLT00000040113

157415936 - 157675543

259608

ENSAPLT00000007924

157415275 - 157673298

258024