Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_157591485_157593734_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

157591485 - 157593734

Intron Length:

2250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCTACCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

TTTCTTCTACCA

Flanking Amino Acid:

QKRFNNNQIYTYIGDILLLV

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

76.5

27.8

Major BPS

70.4

0.51

67.1

39.4

Major PPT

83.8

0.76

0.8

78.3

34.9

Minor 5ss

37.5

-1.4

2.9

41.4

Minor BPS

49.3

-0

1.9

68.77

37.7

Associated Gene:

Gene:

MYO16

Ensembl Gene ID:

ENSAPLG00000007605

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040113

157415936 - 157675543

259608

ENSAPLT00000007924

157415275 - 157673298

258024

ENSAPLT00000042744

157415275 - 157720289

305015