Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_157602098_157608701_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

157602098 - 157608701

Intron Length:

6604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

ATTCTCTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

GCTTTATTGATT

Flanking Amino Acid:

IHDLPALSNKLNPLALPIAK

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

78.6

35.6

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

82.5

0.73

0.7

77.8

30.2

Minor 5ss

41.5

-0.9

3.5

68.1

42.7

Minor BPS

57.2

0.31

1.6

72.14

39.1

Associated Gene:

Gene:

MYO16

Ensembl Gene ID:

ENSAPLG00000007605

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042744

157415275 - 157720289

305015

ENSAPLT00000040113

157415936 - 157675543

259608

ENSAPLT00000007924

157415275 - 157673298

258024