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Intron Name: Anas_platyrhynchos_platyrhynchos_1_157630600_157639701_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
157630600 - 157639701

Intron Length:
9102

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAAGTCAG

5'SS Class:
strong_major

3'SS Sequence:
TTCATTTTTCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTTTCAT

U12 Branch Point Sequence:
AGTCCTTTCATT

Flanking Amino Acid:
SILLMYLEENGVELNSLRQM

Intron Amino Acid Position:
108

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.4
0.81
1
69.2
43.2

Major BPS
87.6
0.93
0.9
89.3
26

Major PPT
87.6
0.85
0.8
80.3
37.1

Minor 5ss
34
-1.8
2.9
42.1
44.4

Minor BPS
55.6
0.26
1.7
72.38
38.8

Associated Gene:

Gene:
MYO16

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

157415936 - 157675543
259608

157415275 - 157673298
258024

157415275 - 157720289
305015