Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_157699245_157719393_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

157699245 - 157719393

Intron Length:

20149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

CCATATCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

TCTTCCATATCT

Flanking Amino Acid:

MSHYHFIKCCCFQLCNVFR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

74.7

35.4

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

0.56

0.9

65.4

40.6

Minor 5ss

38.9

-1.2

2.8

55.7

41.6

Minor BPS

64.5

0.53

1.9

84.93

41.5

Associated Gene:

Gene:

MYO16

Ensembl Gene ID:

ENSAPLG00000007605

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042744

157415275 - 157720289

305015