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Intron Name: Anas_platyrhynchos_platyrhynchos_1_157798838_157800742_F

Intron Information:

Intron Rank:

134638

Intron Class:

major

Intron Phase:

Intron Coordinates:

157798838 - 157800742

Intron Length:

1905

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTCA

5'SS Class:

major

3'SS Sequence:

CATTTTGCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAG

U12 Branch Point Sequence:

TATCTCTGCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

35.3

Major BPS

70.6

0.51

1.5

77.9

34.9

Major PPT

80.1

0.68

0.9

77.3

36.7

Minor 5ss

43.4

-0.7

2.8

60.6

43.7

Minor BPS

48.9

-0

1.9

71.18

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034351

157794190 - 157800892

6703