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Intron Name: Anas_platyrhynchos_platyrhynchos_1_157853083_157854611_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

157853083 - 157854611

Intron Length:

1529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCCTT

5'SS Class:

weak_major

3'SS Sequence:

CTTTCTCATTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GTCACCTTAGCT

Flanking Amino Acid:

QLRILTHFYQGIVQQFLVLL

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.4

1.3

63.8

47.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

83.2

0.75

0.8

81.6

29.2

Minor 5ss

48.3

-0.2

3.2

74.1

42.2

Minor BPS

64.5

0.53

1.7

77.8

44.1

Associated Gene:

Gene:

TUBGCP3

Ensembl Gene ID:

ENSAPLG00000009382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009818

157852815 - 157893591

40777