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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158018055_158021072_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158018055 - 158021072

Intron Length:

3018

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTATAT

U12 Branch Point Sequence:

TGGTGTAAAACT

Flanking Amino Acid:

ECEQPQPDLYKFVGRINIYH

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

74.4

35.9

Major BPS

64.1

0.35

1.2

45.5

Major PPT

84.3

0.77

0.8

78.1

29.9

Minor 5ss

34.5

-1.8

40.9

39.3

Minor BPS

44.2

-0.3

2.2

65.02

45.6

Associated Gene:

Gene:

ATP11A

Ensembl Gene ID:

ENSAPLG00000008836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009238

157937299 - 158051908

114610

ENSAPLT00000042167

157937299 - 158054733

117435

ENSAPLT00000039604

157937299 - 158056885

119587