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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158027462_158029408_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158027462 - 158029408

Intron Length:

1947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTTC

5'SS Class:

strong_major

3'SS Sequence:

TGTTCATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTGTTTCTAATT

Flanking Amino Acid:

TSDLNEELGQIEYVFTDKTG

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

84.7

26.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

83.6

0.76

0.8

77.6

35.6

Minor 5ss

44.1

-0.6

2.9

61.1

43.8

Minor BPS

55.5

0.25

1.7

71.27

40.8

Associated Gene:

Gene:

ATP11A

Ensembl Gene ID:

ENSAPLG00000008836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042167

157937299 - 158054733

117435

ENSAPLT00000039604

157937299 - 158056885

119587

ENSAPLT00000009238

157937299 - 158051908

114610