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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158039058_158039328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158039058 - 158039328

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTTTTGTTTAAG

Flanking Amino Acid:

SMILEAHVGIGIIGKEGRQA

Intron Amino Acid Position:

841

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.08

0.7

85.2

32.2

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

81.6

0.71

86.9

31.1

Minor 5ss

36.3

-1.6

3.3

48.7

47.5

Minor BPS

46.9

-0.3

2.4

63.92

43.8

Associated Gene:

Gene:

ATP11A

Ensembl Gene ID:

ENSAPLG00000008836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009238

157937299 - 158051908

114610

ENSAPLT00000042167

157937299 - 158054733

117435

ENSAPLT00000039604

157937299 - 158056885

119587