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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158157107_158164969_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158157107 - 158164969

Intron Length:

7863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

GTTTATGTAAAT

Flanking Amino Acid:

QLKKQFAYLSGGRGGDGCPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

85.2

0.79

0.7

81.1

30.9

Minor 5ss

35.2

-1.7

49.5

46.3

Minor BPS

0.01

2.2

74.96

41.5

Associated Gene:

Gene:

MCF2L

Ensembl Gene ID:

ENSAPLG00000016231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030243

158121567 - 158219388

97822

ENSAPLT00000023340

158121567 - 158219320

97754

ENSAPLT00000016963

158097228 - 158219388

122161

ENSAPLT00000045274

158075308 - 158219388

144081