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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158193003_158194784_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158193003 - 158194784

Intron Length:

1782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

DQLDNQTTVERLLAQLHETE

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.9

33.7

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

0.72

86.9

31.1

Minor 5ss

27.4

-2.6

2.7

31.6

42.2

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

MCF2L

Ensembl Gene ID:

ENSAPLG00000016231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016963

158097228 - 158219388

122161

ENSAPLT00000045274

158075308 - 158219388

144081

ENSAPLT00000030243

158121567 - 158219388

97822

ENSAPLT00000023340

158121567 - 158219320

97754