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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158198538_158199551_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158198538 - 158199551

Intron Length:

1014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATTAT

U12 Branch Point Sequence:

CTGTGATTATTT

Flanking Amino Acid:

LRKVNYRRGKSEMTELHQSR

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

69.6

0.49

1.2

60.1

46.3

Major PPT

86.1

0.81

0.6

85.4

21.9

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

45.3

-0.2

2.2

64.34

46.5

Associated Gene:

Gene:

MCF2L

Ensembl Gene ID:

ENSAPLG00000016231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045274

158075308 - 158219388

144081

ENSAPLT00000030243

158121567 - 158219388

97822

ENSAPLT00000023340

158121567 - 158219320

97754

ENSAPLT00000016963

158097228 - 158219388

122161