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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158208472_158209124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158208472 - 158209124

Intron Length:

653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TAGTTATAAATA

Flanking Amino Acid:

MHQIAITGYDGNLNELGKLL

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

79.5

28.3

Major BPS

78.6

0.71

78.6

Major PPT

87.6

0.85

0.8

80.3

37.3

Minor 5ss

-1.9

2.8

41.3

38.3

Minor BPS

48.8

-0

1.9

60.9

39.6

Associated Gene:

Gene:

MCF2L

Ensembl Gene ID:

ENSAPLG00000016231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016963

158097228 - 158219388

122161

ENSAPLT00000045274

158075308 - 158219388

144081

ENSAPLT00000030243

158121567 - 158219388

97822

ENSAPLT00000023340

158121567 - 158219320

97754