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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158212899_158218100_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158212899 - 158218100

Intron Length:

5202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTCACAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TGTTTGTTCACA

Flanking Amino Acid:

VAPKYPEKGKGWAKTSHSLD

Intron Amino Acid Position:

984

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.04

0.7

89.2

17.6

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

66.4

0.37

1.1

67.9

37.1

Minor 5ss

38.3

-1.3

2.9

47.2

Minor BPS

49.8

-0

2.4

71.26

41.2

Associated Gene:

Gene:

MCF2L

Ensembl Gene ID:

ENSAPLG00000016231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045274

158075308 - 158219388

144081

ENSAPLT00000023340

158121567 - 158219320

97754

ENSAPLT00000016963

158097228 - 158219388

122161