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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158219169_158219293_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158219169 - 158219293

Intron Length:

125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGCTAT

5'SS Class:

major

3'SS Sequence:

TTCCCCTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTCTTTTCCT

Flanking Amino Acid:

SKSAQSLSSSESGTASSTLS

Intron Amino Acid Position:

1100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

1.1

67.6

40.2

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

80.1

0.68

0.7

72.4

32.2

Minor 5ss

44.3

-0.6

3.2

60.4

46.7

Minor BPS

48.1

-0

3.6

87.77

37.8

Associated Gene:

Gene:

MCF2L

Ensembl Gene ID:

ENSAPLG00000016231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045274

158075308 - 158219388

144081

ENSAPLT00000030243

158121567 - 158219388

97822

ENSAPLT00000016963

158097228 - 158219388

122161