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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158228871_158228963_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158228871 - 158228963

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGAGCA

5'SS Class:

major

3'SS Sequence:

CGTGTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

TGATCCGGACTG

Flanking Amino Acid:

RTKEFWHIYSDPNQCDSSPC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

39.3

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

82.2

0.72

0.9

76.3

37.7

Minor 5ss

29.8

-2.3

3.5

39.5

45.9

Minor BPS

42.1

-0.7

2.3

49.74

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003856

158226007 - 158234547

8541