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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158233248_158233720_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158233248 - 158233720

Intron Length:

473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATAAAT

U12 Branch Point Sequence:

CAGACATAAATT

Flanking Amino Acid:

ICPHGECPWQALIIQNQKEK

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

80.7

33.7

Major BPS

62.2

0.3

1.1

68.9

Major PPT

76.3

0.59

1.1

72.9

42.2

Minor 5ss

36.4

-1.5

3.2

50.5

Minor BPS

45.8

-0.2

1.9

58.78

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003856

158226007 - 158234547

8541