Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_158269949_158270482_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158269949 - 158270482

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGTGAT

5'SS Class:

major

3'SS Sequence:

CATTGCTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

ATGTTCTTAAGG

Flanking Amino Acid:

HSHFEIRVGAGHNRTCGTER

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

72.7

38.8

Major BPS

82.2

0.8

71.9

35.8

Major PPT

75.2

0.57

0.9

68.2

37.2

Minor 5ss

33.4

-1.9

3.6

48.8

47.3

Minor BPS

62.7

0.26

1.7

64.94

43.2

Associated Gene:

Gene:

PROZ

Ensembl Gene ID:

ENSAPLG00000002834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002870

158263439 - 158270994

7556