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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158272470_158273453_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158272470 - 158273453

Intron Length:

984

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

CCAGTACTAACA

Flanking Amino Acid:

QCILANLIYMGHIKGYISHQ

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

73.2

35.6

Major BPS

76.8

0.67

0.9

75.9

Major PPT

79.4

0.66

0.9

73.6

36.9

Minor 5ss

41.6

-0.9

3.1

55.7

43.9

Minor BPS

-0.5

1.9

49.21

41.6

Associated Gene:

Gene:

PCID2

Ensembl Gene ID:

ENSAPLG00000002544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002590

158272380 - 158282398

10019