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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158275907_158276302_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158275907 - 158276302

Intron Length:

396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGTGT

5'SS Class:

major

3'SS Sequence:

TTTGTGCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ACTCTTGTAACT

Flanking Amino Acid:

KAMFDSDFKQAEEYLSFAFE

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.4

43.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

80.4

0.68

0.9

36.8

Minor 5ss

37.5

-1.4

3.5

56.6

47.6

Minor BPS

50.8

0.1

70.72

40.8

Associated Gene:

Gene:

PCID2

Ensembl Gene ID:

ENSAPLG00000002544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002590

158272380 - 158282398

10019