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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158277502_158278847_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

158277502 - 158278847

Intron Length:

1346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTAACGTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAGTTAT

U12 Branch Point Sequence:

TGCTGTGTAACG

Flanking Amino Acid:

ALDLRIFANNADQQLMKKGK

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

80.1

34.8

Major BPS

55.8

0.14

1.4

49.4

Major PPT

58.6

0.19

1.1

56.9

43.5

Minor 5ss

37.5

-1.4

2.8

41.7

Minor BPS

45.6

-0.4

2.4

55.14

46.4

Associated Gene:

Gene:

PCID2

Ensembl Gene ID:

ENSAPLG00000002544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002590

158272380 - 158282398

10019