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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158288118_158290136_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

5UTR

Intron Coordinates:

158288118 - 158290136

Intron Length:

2019

Sequence Information:

Terminal Dinucleotides:

AT-AC

5'SS Sequence:

AGA|ATATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

ATAGGTGTTGTAC|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

TTTTCCTTAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

30.9

-1.1

3.3

44.2

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

37.1

-0.7

3.1

47.1

45.2

Minor 5ss

96.3

1.54

0.8

89.8

28.6

Minor BPS

93.3

1.36

0.6

95.44

19.5

Associated Gene:

Gene:

CUL4A

Ensembl Gene ID:

ENSAPLG00000001201

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034357

158283537 - 158317561

34025

ENSAPLT00000001455

158283537 - 158317871

34335