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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158309345_158310519_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158309345 - 158310519

Intron Length:

1175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAG

U12 Branch Point Sequence:

AAAACGCTAATA

Flanking Amino Acid:

TPMEVHLNSEMIKLQEVFKT

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

86.4

29.2

Major BPS

56.1

0.15

1.6

64.3

39.7

Major PPT

86.2

0.81

0.8

80.4

31.5

Minor 5ss

-1.7

3.3

46.3

Minor BPS

43.5

-0.4

2.2

53.73

38.1

Associated Gene:

Gene:

CUL4A

Ensembl Gene ID:

ENSAPLG00000001201

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034357

158283537 - 158317561

34025

ENSAPLT00000001455

158283537 - 158317871

34335