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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158332134_158332229_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158332134 - 158332229

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACTTC

5'SS Class:

strong_major

3'SS Sequence:

GGTCTTTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

AAACTGTTACCT

Flanking Amino Acid:

DTTLFHNSTEGKMMEASQKS

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.6

35.3

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

74.8

0.56

0.9

68.4

37.4

Minor 5ss

47.8

-0.2

2.9

67.4

Minor BPS

44.7

-0.3

2.2

61.53

Associated Gene:

Gene:

LAMP1

Ensembl Gene ID:

ENSAPLG00000015580

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016252

158329945 - 158339032

9088