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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158338576_158338892_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158338576 - 158338892

Intron Length:

317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TAGTGCCTAATG

Flanking Amino Acid:

FKVDGDKFGAVEECQLDENN

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.7

85.2

32.2

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

90.4

0.91

0.6

88.8

20.5

Minor 5ss

34.4

-1.8

3.3

49.7

46.6

Minor BPS

48.2

-0.2

2.1

57.08

44.6

Associated Gene:

Gene:

LAMP1

Ensembl Gene ID:

ENSAPLG00000015580

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016252

158329945 - 158339032

9088