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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158354821_158357769_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158354821 - 158357769

Intron Length:

2949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

GCGTCTTAAAAT

Flanking Amino Acid:

HHNKAVGYCQGMNFIAGYLI

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.5

35.1

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

93.1

0.97

0.6

91.8

Minor 5ss

43.5

-0.7

2.6

60.2

44.3

Minor BPS

51.1

0.11

1.8

65.32

45.3

Associated Gene:

Gene:

GRTP1

Ensembl Gene ID:

ENSAPLG00000015320

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040888

158224521 - 158370756

146236

ENSAPLT00000015970

158340329 - 158370756

30428