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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158395575_158400411_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158395575 - 158400411

Intron Length:

4837

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAAGCGG

5'SS Class:

major

3'SS Sequence:

TTCTCTTGCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

ATGCCTTGAAAA

Flanking Amino Acid:

ENLYRLSTQENTKRTNSCGD

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.1

51.4

45.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

79.1

0.66

0.9

32.5

Minor 5ss

31.2

-2.1

3.4

38.2

41.2

Minor BPS

52.1

0.06

1.5

61.69

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017344

158390765 - 158421872

31108