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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158470225_158471002_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158470225 - 158471002

Intron Length:

778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TGTTGGTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GTTTCCATGACT

Flanking Amino Acid:

LAGTVRGDKEGDIDYSSVLL

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

81.8

38.5

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

71.6

0.49

1.1

65.2

45.5

Minor 5ss

38.9

-1.2

2.8

43.3

43.8

Minor BPS

73.5

0.82

1.6

89.64

34.1

Associated Gene:

Gene:

TMCO3

Ensembl Gene ID:

ENSAPLG00000014778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015416

158456422 - 158486161

29740