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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158571693_158571853_F


Intron Information:

Intron Rank:
1

Intron Class:
major-like

Intron Phase:
1

Intron Coordinates:
158571693 - 158571853

Intron Length:
161

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGGAGG

5'SS Class:
strong_major

3'SS Sequence:
GCAATCGTGAAAG|G

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
TCTTCAT

U12 Branch Point Sequence:
TTTCTCTTCATA

Flanking Amino Acid:
PGPLALLDPTGHSSVSQGIC

Intron Amino Acid Position:
20

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.2
0.81
0.9
69.5
42.7

Major BPS
87.4
0.93
0.9
87.9
29.5

Major PPT
47.8
-0.1
1.2
43.9
41.3

Minor 5ss
26.2
-2.7
2.9
30.6
42.9

Minor BPS
62.9
0.4
1.7
76.1
35.4

Associated Gene:

Gene:
TMEM255B

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

158571535 - 158633625
62091

158571535 - 158633625
62091

158571535 - 158633625
62091