About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_158628721_158633457_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
158628721 - 158633457

Intron Length:
4737

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACAGTAC

5'SS Class:
major

3'SS Sequence:
TGTCTGTATACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAATCAT

U12 Branch Point Sequence:
TAATCATTTATT

Flanking Amino Acid:
TYPSYPLPLQPASNFPGTSS

Intron Amino Acid Position:
280

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.2
0.5
1.1
63.5
37.6

Major BPS
80.4
0.76
1
80.3
31.8

Major PPT
75.1
0.57
1
68.9
41.2

Minor 5ss
35.3
-1.7
3.5
49.3
47.2

Minor BPS
56.1
0.27
1.9
75.44
41

Associated Gene:

Gene:
TMEM255B

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

158571535 - 158633625
62091

158571535 - 158633625
62091

158571535 - 158633625
62091

158571535 - 158633625
62091

158571535 - 158633625
62091