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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158654730_158658903_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
158654730 - 158658903

Intron Length:
4174

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTAAGCACT

5'SS Class:
major

3'SS Sequence:
TTCTGTAAATCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTGTTTTATTT

Flanking Amino Acid:
RSPDFLTCVHNLPNQCSPDP

Intron Amino Acid Position:
150

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.8
0.51
1.1
69.4
41.2

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
68.5
0.42
1
67.9
41.5

Minor 5ss
44.2
-0.6
2.9
64.9
39.9

Minor BPS
59.9
0.39
1.6
78.46
39

Associated Gene:

Gene:
GAS6

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

158615616 - 158672662
57047