Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_158717518_158720251_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158717518 - 158720251

Intron Length:

2734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTACTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TCTGTTTTAACA

Flanking Amino Acid:

VKKVDGNSSCRFMIKRAQGR

Intron Amino Acid Position:

660

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.7

43.7

Major BPS

89.7

0.98

0.7

89.9

Major PPT

75.3

0.57

0.9

70.1

35.3

Minor 5ss

43.2

-0.7

2.9

55.9

48.3

Minor BPS

69.5

0.61

1.3

73.92

38.7

Associated Gene:

Gene:

RASA3

Ensembl Gene ID:

ENSAPLG00000012988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019147

158710463 - 158811255

100793

ENSAPLT00000013671

158710463 - 158811255

100793