Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_158733401_158736866_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158733401 - 158736866

Intron Length:

3466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTGGTATT

5'SS Class:

major

3'SS Sequence:

TCTTTTTTATTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TCTTTTTTATTA

Flanking Amino Acid:

PHFDEVFYFEVTRPSSYNKK

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.2

36.1

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

83.9

0.76

0.8

85.7

27.3

Minor 5ss

36.6

-1.5

3.1

51.4

45.2

Minor BPS

61.6

0.36

1.5

69.82

37.7

Associated Gene:

Gene:

RASA3

Ensembl Gene ID:

ENSAPLG00000012988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033795

158710463 - 158811447

100985

ENSAPLT00000019147

158710463 - 158811255

100793

ENSAPLT00000013671

158710463 - 158811255

100793