Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_158861552_158861896_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158861552 - 158861896

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGCTTG

5'SS Class:

major

3'SS Sequence:

CCCCGATATTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GCTGATTTACTT

Flanking Amino Acid:

EVGVVAFQNGDWKTAEKWFL

Intron Amino Acid Position:

418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

63.4

43.8

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

61.5

0.26

0.9

58.1

36.5

Minor 5ss

48.7

-0.1

2.8

61.1

44.5

Minor BPS

46.4

-0.2

1.8

60.65

43.8

Associated Gene:

Gene:

CDC16

Ensembl Gene ID:

ENSAPLG00000012294

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012884

158849217 - 158867417

18201