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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158861961_158862592_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158861961 - 158862592

Intron Length:

632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CATTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAA

U12 Branch Point Sequence:

TCTACTTGAATT

Flanking Amino Acid:

LEKIKAIGNEVTVDKWEPLL

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

Major BPS

65.8

0.39

57.3

39.4

Major PPT

82.8

0.74

0.9

76.8

36.6

Minor 5ss

53.1

0.1

2.3

69.7

41.2

Minor BPS

63.8

0.51

1.5

77.29

39.6

Associated Gene:

Gene:

CDC16

Ensembl Gene ID:

ENSAPLG00000012294

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012884

158849217 - 158867417

18201