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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158865770_158866886_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158865770 - 158866886

Intron Length:

1117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

ACTGTTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

AATGGTTTGACT

Flanking Amino Acid:

MYIGDSEAYIGTEIKDKLRC

Intron Amino Acid Position:

536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.5

41.9

Major BPS

77.9

0.69

0.8

75.9

Major PPT

73.1

0.52

0.9

65.6

40.4

Minor 5ss

-1.4

47.2

42.5

Minor BPS

51.1

0.12

1.9

69.63

41.7

Associated Gene:

Gene:

CDC16

Ensembl Gene ID:

ENSAPLG00000012294

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012884

158849217 - 158867417

18201