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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158882027_158882121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158882027 - 158882121

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

TTTATCTTCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

ATTAACATAATT

Flanking Amino Acid:

KDAKAGSIEDDPEYRKFLES

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

79.8

35.3

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

85.3

0.79

0.8

80.8

Minor 5ss

43.1

-0.8

2.9

54.5

43.9

Minor BPS

56.1

0.27

1.8

77.67

38.1

Associated Gene:

Gene:

UPF3A

Ensembl Gene ID:

ENSAPLG00000012944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044465

158877595 - 158892168

14574