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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158882233_158885650_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158882233 - 158885650

Intron Length:

3418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTCTGTTTT

5'SS Class:

major

3'SS Sequence:

TTTTGTGTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAC

U12 Branch Point Sequence:

TATATCACAAAT

Flanking Amino Acid:

IEAKTRELIARRTTPLLEY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.3

73.2

38.4

Major BPS

69.5

0.49

71.8

33.3

Major PPT

82.6

0.73

0.9

81.2

36.5

Minor 5ss

47.8

-0.2

2.6

64.1

42.5

Minor BPS

-0.1

1.9

68.83

41.1

Associated Gene:

Gene:

UPF3A

Ensembl Gene ID:

ENSAPLG00000012944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013466

158882205 - 158892168

9964

ENSAPLT00000044465

158877595 - 158892168

14574