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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158885878_158887306_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

158885878 - 158887306

Intron Length:

1429

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCGCAGGGA

5'SS Class:

weak_major

3'SS Sequence:

AAATATTTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TACATCATAATA

Flanking Amino Acid:

ETSAGGGEKELLKKPEKGDD

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.1

0.07

1.2

49.9

35.9

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

0.36

42.8

Minor 5ss

12.8

-4.3

3.8

18.9

35.7

Minor BPS

52.1

0.06

1.6

61.79

38.4

Associated Gene:

Gene:

UPF3A

Ensembl Gene ID:

ENSAPLG00000012944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044465

158877595 - 158892168

14574