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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158885957_158889092_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

158885957 - 158889092

Intron Length:

3136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTTAA

5'SS Class:

major

3'SS Sequence:

AAAAAAAAAAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTTCTAATAATA

Flanking Amino Acid:

KISEKEIRIKPYHTTHLKKV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.1

72.9

34.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

37.6

-0.7

1.6

23.6

33.9

Minor 5ss

54.1

0.14

2.1

66.7

44.7

Minor BPS

47.9

-0.1

1.8

62.52

37.6

Associated Gene:

Gene:

UPF3A

Ensembl Gene ID:

ENSAPLG00000012944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013466

158882205 - 158892168

9964