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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158889510_158891994_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158889510 - 158891994

Intron Length:

2485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTCTTTTA

5'SS Class:

major

3'SS Sequence:

TGCTTCCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTAACCATATTT

Flanking Amino Acid:

ASKKERIRNKDRPAMQLYQP

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.38

1.2

69.2

37.8

Major BPS

0.65

1.5

85.7

34.9

Major PPT

77.9

0.63

0.8

36.6

Minor 5ss

39.1

-1.2

2.9

50.9

45.4

Minor BPS

52.2

0.15

1.9

74.91

41.6

Associated Gene:

Gene:

UPF3A

Ensembl Gene ID:

ENSAPLG00000012944

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013466

158882205 - 158892168

9964

ENSAPLT00000044465

158877595 - 158892168

14574