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Intron Name: Anas_platyrhynchos_platyrhynchos_1_158910376_158911152_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158910376 - 158911152

Intron Length:

777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTCGTAAG

5'SS Class:

major

3'SS Sequence:

CTTGTTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAT

U12 Branch Point Sequence:

CTTGTTTTCACA

Flanking Amino Acid:

DSWKPSFFPEDEQSILAKES

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.2

70.2

41.7

Major BPS

79.2

0.72

Major PPT

84.1

0.77

0.8

79.2

32.9

Minor 5ss

30.4

-2.2

2.6

33.8

41.6

Minor BPS

51.7

0.05

1.9

65.59

41.9

Associated Gene:

Gene:

CHAMP1

Ensembl Gene ID:

ENSAPLG00000029506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023353

158908975 - 158912544

3570