Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_158977802_158985844_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

158977802 - 158985844

Intron Length:

8043

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGACTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

CATTTTTGGACT

Flanking Amino Acid:

RDIGPENKPVSLQEAYEAKR

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.4

34.2

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

78.5

0.64

0.9

74.8

39.9

Minor 5ss

30.2

-2.3

3.7

45.9

49.3

Minor BPS

0.3

1.5

71.69

39.6

Associated Gene:

Gene:

SEPTIN10

Ensembl Gene ID:

ENSAPLG00000012998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013559

158967737 - 158988866

21130