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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159012698_159032399_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159012698 - 159032399

Intron Length:

19702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGCC

5'SS Class:

major

3'SS Sequence:

GGTTCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAT

U12 Branch Point Sequence:

ACTGCCCTAATT

Flanking Amino Acid:

SKAEERKNEKKEKKSGLLKL

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

71.5

33.9

Major BPS

69.6

0.49

1.1

69.5

Major PPT

82.8

0.74

0.9

76.8

37.3

Minor 5ss

29.1

-2.4

3.7

41.3

45.5

Minor BPS

0.36

1.8

74.77

42.4

Associated Gene:

Gene:

SH3RF3

Ensembl Gene ID:

ENSAPLG00000019711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019343

159011613 - 159086047

74435