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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159043637_159055164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

159043637 - 159055164

Intron Length:

11528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTGAATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

CTTTCTTGAATT

Flanking Amino Acid:

AHLSSSAPAQDSSSIGTVAG

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

74.6

0.61

65.6

41.4

Major PPT

80.3

0.68

0.9

77.2

41.4

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

71.9

0.76

1.4

84.4

36.8

Associated Gene:

Gene:

SH3RF3

Ensembl Gene ID:

ENSAPLG00000019711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019343

159011613 - 159086047

74435