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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159390972_159395530_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

159390972 - 159395530

Intron Length:

4559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGACTCTG

5'SS Class:

weak_major

3'SS Sequence:

TGAGTTTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

GGTTTCTGAGTT

Flanking Amino Acid:

KTLGSNVDTSDKVQKKLNLI

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.7

0.13

1.3

45.5

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

64.2

0.32

1.1

58.3

47.1

Minor 5ss

40.8

-1

3.1

59.7

44.7

Minor BPS

52.6

0.16

1.7

70.3

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030878

159390864 - 159396049

5186