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Intron Name: Anas_platyrhynchos_platyrhynchos_1_159392744_159394280_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

159392744 - 159394280

Intron Length:

1537

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCTACTACT

5'SS Class:

major

3'SS Sequence:

GGCAGTGAGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

CCCCTTTTGAGG

Flanking Amino Acid:

EFKQKFEECQRGCDGLASYR

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.3

77.8

38.7

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

39.5

-0.6

1.7

30.9

40.9

Minor 5ss

29.9

-2.3

3.7

44.5

42.8

Minor BPS

43.3

-0.6

1.6

38.02

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039393

159392701 - 159394759

2059